Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015818629.1_cds_XP_016499725.1_13620
CDS Infomation

[gene=LOC107818256] [db_xref=GeneID:107818256] [protein=putative pentatricopeptide repeat-containing protein At1g68930] [protein_id=XP_016499725.1] [location=complement(31014..32465)] [gbkey=CDS]
Sequence

ATGTGGACTCAATCCTATTCCCAGTATGAAACAGGACCAAACTTCTATTCCATCACTAAC
ATCTTTCACCATTTTTGCAACTCAAAGAATCTGAGAGCCATTAAAGTATTTCATGCACAT
CTAATTAGAACAGGATTACTCTTTATCTCCCCTAACTTTCAATTCAAACTCATATCTACT
ACATGCACAACTACTTCACTTCCCAATGGTAATAACCTTAAAACCTTAATCAACTTCTTC
AAATTCCTCAAACCCAAAAACTCTTTGCTCTTAAATTCAATTCTTTCCCATTTTTCACAA
AATGGGTTTCATTTTCTTGCTCTTAAAACATTCTCTTTCATGCATTTTAGTGCTATCGAC
ATTGATTCATACACCTTGTGTAGCTCCATTACAGCTTCATCTGCTATTAAAAATGTAAAC
TTTGGGCAAATGGTTCATACCCTTGTGCATAAATCAGGTTGGATTTCTAGTGTTTATGTG
GGGTCTGCTTTGATTGACATGTATGCCAAATCGTTGTGTATCAAGAACGCAGCTGTGTTG
TTCGATGAAATTCCTGTGAAGAACACAGTGTGCGTGAACGCGCTTCTTTCGGGCTATTCT
GAAGCTAAGATGTGGATGGAGGGGTTGGCATTGGTTAGGAACATGCCGTGCTTGAATCTA
TCTTGGGATAATTTCACTTTTTCAGCTGCTTTGCGTGCTTGCGTTGGGCTCTCTGCATTT
GAATTGGGTAAGCAAGTTCATGGACGTGTTATTCGAAAACTTCATGACTTGGAATCTGAT
GTTTTTCTTCAAAGTTTGTTGATTGAAATGTATGGCAAATGTGGGTCAGTGGAGAAGGCT
AGGCATGTATTCGACATGGTCGGCTTTAGATGTGGAGAAAGAAAGAAGGATGTTGTTCTT
TGGACATCAATGCTTGGTGTTTGCGGAAGAAATGGGAAATTTGAAGAAGTGATTAATTTG
TTTAATAACATGGTGATGGATGGAATTAAACCAGATGGTGTAGCATTGTTGACTGTTCTC
TCCGCTTGTAGTCACACTGGCCACGTAAATCTTGGAATGAAGTACTTTGAATCAATGGCA
TCTAATTACAGTTTGGAACCCAGCCCCGAGCACTACAGTTGTGTGATTGATTTACTGTGT
CGTGCAGGTGAGTTGGATAGAGCATGGAAACTAATCAACGAGTTATCTTACAAAGATAAT
GATAATTTCACTGTTACCTTGTGGGGAGCCTTGCTTAGTGCCTGCCATAACTTTGACAAT
GTCGAACTAGGTATAGTAGCTGCTCAAAGGGCATTGGATTTGGACCCTCAAAATGACGGG
GTTTATGTTCTGCTATCGAACATGTATGCCAGGAATGGCATGTGGAATGAAATTGAGATG
TTGAGGGAACAGATAAAAGAGAAGGGATTAAAGAAAGACATAGGACATAGCTTGGTGGAT
ATCTGTAGATGA

Peptide Sequence

PEP ID

XP_016499725.1
PEP Infomation

PREDICTED: putative pentatricopeptide repeat-containing protein At1g68930 [Nicotiana tabacum]
Sequence

MWTQSYSQYETGPNFYSITNIFHHFCNSKNLRAIKVFHAHLIRTGLLFISPNFQFKLIST
TCTTTSLPNGNNLKTLINFFKFLKPKNSLLLNSILSHFSQNGFHFLALKTFSFMHFSAID
IDSYTLCSSITASSAIKNVNFGQMVHTLVHKSGWISSVYVGSALIDMYAKSLCIKNAAVL
FDEIPVKNTVCVNALLSGYSEAKMWMEGLALVRNMPCLNLSWDNFTFSAALRACVGLSAF
ELGKQVHGRVIRKLHDLESDVFLQSLLIEMYGKCGSVEKARHVFDMVGFRCGERKKDVVL
WTSMLGVCGRNGKFEEVINLFNNMVMDGIKPDGVALLTVLSACSHTGHVNLGMKYFESMA
SNYSLEPSPEHYSCVIDLLCRAGELDRAWKLINELSYKDNDNFTVTLWGALLSACHNFDN
VELGIVAAQRALDLDPQNDGVYVLLSNMYARNGMWNEIEMLREQIKEKGLKKDIGHSLVD
ICR

Transcript Sequence

Gene sequence data has not been registered.